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          • › Search Tool
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          • › Rn01457908_m1
          See other PAF1 GE Assays ›
          Gene Symbol:
          Paf1
          Gene Name:
          Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
          Gene Aliases:
          RGD1306219
          Chromosome Location:
          Chr.1: 85362421 - 85367999 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01457908_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Paf1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001024898.1 NP_001020069.1 11 - 12 1190 94
          GenBank mRNA BC097494.1 - 11 - 12 1190 94

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100005071.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Paf1

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          endodermal cell fate commitment
          transcription, DNA-templated
          mRNA polyadenylation
          biological_process
          histone monoubiquitination
          Wnt signaling pathway
          stem cell population maintenance
          positive regulation of mRNA 3'-end processing
          positive regulation of transcription elongation from RNA polymerase II promoter
          histone H2B ubiquitination
          negative regulation of myeloid cell differentiation
          positive regulation of transcription by RNA polymerase II
          cellular response to lipopolysaccharide
          RNA polymerase II complex binding
          molecular_function
          chromatin binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P991399 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 755558 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 861199 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 510244 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 158660 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P991399 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P991399 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P991399 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P991399 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P349250 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 43913 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10705527 - -
          Affymetrix Rat Gene 1.0 ST Array 10705533 - -
          Affymetrix Rat Gene 1.0 ST Array 10705526 - -
          Affymetrix Rat Gene 1.0 ST Array 10705535 - -
          Affymetrix Rat Gene 1.0 ST Array 10705538 - -
          Affymetrix Rat Gene 1.0 ST Array 10705529 - -
          Affymetrix Rat Gene 1.0 ST Array 10705534 - -
          Affymetrix Rat Gene 1.0 ST Array 10705530 - -
          Affymetrix Rat Gene 1.0 ST Array 10705537 - -
          Affymetrix Rat Gene 1.0 ST Array 10705536 - -
          Affymetrix Rat Gene 1.0 ST Array 10705525 - -
          Affymetrix Rat Gene 1.0 ST Array 10705532 - -
          Affymetrix Rat Gene 1.0 ST Array 10705528 - -
          Affymetrix Rat Gene 1.0 ST Array 10705531 - -
          Affymetrix Rat Gene 1.1 ST Array 10705524 - -
          Rat Genome 230 2.0 Array 1386856_PM_a_at - -
          Rat Genome 230 2.0 Array 1386854_PM_at - -
          Rat Genome 230 2.0 Array 1394105_at - -
          Rat Genome 230 2.0 Array 1386856_a_at - -
          Rat Genome 230 2.0 Array 1373455_at - -
          Rat Genome 230 2.0 Array 1386854_at - -
          Rat Genome 230 2.0 Array 1394105_PM_at - -
          Rat Genome 230 2.0 Array 1374992_at - -
          Rat Genome 230 2.0 Array 1373455_PM_at - -
          Rat Genome 230 2.0 Array 1374992_PM_at - -
          Affymetrix HT Rat Focus Array 1373455_PM_at - -
          Affymetrix HT Rat Focus Array 1373455_at - -
          Affymetrix Rat Clariom S Assay PSR0100040407.rn.1 TC0100005071.rn.1 RTA TC
          Rat Expression Set 230 1373455_at - -
          Rat Expression Set 230 1373455_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10705524 - -
          Rat Genome U34 Set rc_AA944365_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22211590 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1367164 - -

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