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- Gene Symbol:
-
Casq2 - Gene Name:
- calsequestrin 2 (cardiac muscle)
- Gene Aliases:
- cardCSQ
- Chromosome Location:
- Chr.2: 204512361 - 204568643 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Casq2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_017131.2 | NP_058827.3 | 2 - 3 | 475 | 79 | |
| GenBank mRNA | BC072547.1 | - | 2 - 3 | 462 | 79 | |
| U33287.1 | - | 2 - 3 | 456 | 79 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200001860.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
regulation of heart rate
biological_process
regulation of cell communication by electrical coupling
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
negative regulation of potassium ion transport
sarcomere organization
sequestering of calcium ion
protein polymerization
cardiac muscle contraction
regulation of membrane repolarization
negative regulation of ryanodine-sensitive calcium-release channel activity
cellular response to caffeine
regulation of cardiac muscle cell contraction
negative regulation of potassium ion transmembrane transporter activity
protein kinase C binding
calcium ion binding
protein homodimerization activity
calcium-dependent protein binding
regulation of heart rate
biological_process
regulation of cell communication by electrical coupling
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
negative regulation of potassium ion transport
sarcomere organization
sequestering of calcium ion
protein polymerization
cardiac muscle contraction
regulation of membrane repolarization
negative regulation of ryanodine-sensitive calcium-release channel activity
cellular response to caffeine
regulation of cardiac muscle cell contraction
negative regulation of potassium ion transmembrane transporter activity
protein kinase C binding
calcium ion binding
protein homodimerization activity
calcium-dependent protein binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P144869 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 479015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 781921 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 721829 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 500812 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 429688 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 848468 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 928111 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 591222 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 903318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 866884 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 44930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 311988 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 455380 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 635101 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 666482 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 229592 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 484165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 319059 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 302049 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 316745 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 134800 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 427555 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 215818 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 624825 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 855660 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 553083 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583084 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 653872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 664657 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 356388 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 120397 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 2986 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 873001 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 269110 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 298570 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341482 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556799 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 764832 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432877 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 123119 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 175508 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 48514 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 1463 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 170871 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 126033 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 91848 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P144869 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P144869 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P144869 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P470772 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45708 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 40774 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1970 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 30571 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 60767 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10817891 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817885 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817892 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817884 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817883 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817889 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817893 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817882 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817887 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817886 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817890 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817888 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10817881 | - | - |
| Rat Genome 230 2.0 Array | 1368988_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387401_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387401_at | - | - |
| Rat Genome 230 2.0 Array | 1368988_at | - | - |
| Affymetrix HT Rat Focus Array | 1368988_at | - | - |
| Affymetrix HT Rat Focus Array | 1387401_at | - | - |
| Affymetrix HT Rat Focus Array | 1368988_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387401_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200012638.rn.1 | TC0200001860.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200012637.rn.1 | TC0200001860.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387401_at | - | - |
| Rat Expression Set 230 | 1368988_PM_at | - | - |
| Rat Expression Set 230 | 1368988_at | - | - |
| Rat Expression Set 230 | 1387401_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817881 | - | - |
| Rat Genome U34 Set | U33287_at | - | - |
| Rat Genome U34 Set | rc_AA924985_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21925078 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1357616 | - | - |
| RatRef-12 Expression BeadChip | ILMN_57338 | - | - |
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