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Gene Symbol:
Hoxa11os
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm01333021_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: Hoxa11os
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_015348.1
4 - 5 1156 72
GenBank mRNA AK133929.1 -
2 - 3 377 72
U20366.1 - LIT1565
Hoxa11as		 4 - 5 1156 72
U20367.1 - LIT1564
Hoxa11as		 2 - 3 724 72
U20369.1 - LIT1563
Hoxa11as		 2 - 3 361 72
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BQ947522.1 - 2 - 3 487 Chr. 6 - 52245601 - 52249455 [+] on Build GRCm38 72
GenBankmRNA BB619336.1 - 2 - 3 377 Chr. 6 - 52245999 - 52249352 [+] on Build GRCm38 72
GenBankmRNA BU514279.1 - 2 - 3 358 Chr. 6 - 52246018 - 52249633 [+] on Build GRCm38 72
GenBankmRNA CB952841.1 - 2 - 3 409 Chr. 6 - 52245398 - 52249418 [+] on Build GRCm38 72
GenBankmRNA BU841106.1 - 2 - 3 349 Chr. 6 - 52246027 - 52249637 [+] on Build GRCm38 72
GenBankmRNA CB321051.1 - 2 - 3 360 Chr. 6 - 52245990 - 52249494 [+] on Build GRCm38 72
GenBankmRNA BU510551.1 - 2 - 3 341 Chr. 6 - 52246009 - 52249573 [+] on Build GRCm38 72
GenBankmRNA BU519467.1 - 2 - 3 407 Chr. 6 - 52245969 - 52249498 [+] on Build GRCm38 72

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream homeobox A11 Hoxa11 Hox-1.9,
Hoxa-11 		-853.0 Anti-sense Chr. 6 - 52242105 - 52245810 on NCBI Build GRCm38
Downstream homeobox A13 Hoxa13 Hd,
Hox-1.10 		9.4kb Anti-sense Chr. 6 - 52258853 - 52260880 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600000623.mm.1

Set Membership:

 Amplicon length between 71 and 85 3' Most Mus musculus 1700 Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI


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