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          • › Mm01238643_s1
          See other TSIX GE Assays ›
          Gene Symbol:
          Tsix
          Gene Name:
          X (inactive)-specific transcript, opposite strand
          Gene Aliases:
          -
          Chromosome Location:
          Chr.X: 103431517 - 103484957 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01238643_s1
          Size
          Availability Made To Order
          Catalog # 4426961
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Tsix
          Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NR_002844.2
          4 2564 69
          GenBank mRNA AF138745.1 - LIT1604
          Tsix
          4 2559 69
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
          GenBankmRNA AJ421479.1 - Chr. - - [-] on Build 69

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream testis specific X-linked gene Tsx AV207184 -56.7kb Sense Chr. X - 103409101 - 103424588 on NCBI Build GRCm38
          Downstream Jpx transcript,
          Xist activator (non-protein coding)
          Jpx 2010000I03Rik,
          2510040I06Rik,
          Enox
          8.6kb Sense Chr. X - 103493576 - 103506425 on NCBI Build GRCm38

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0X00003398.mm.1

          Set Membership:

          Amplicon length less than or equal to 70 3' Most Detect Genomic DNA Mus musculus Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          dosage compensation by inactivation of X chromosome
          chromatin-mediated maintenance of transcription
          inactivation of paternal X chromosome
          protein binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2153116 AF138745.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 679577 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 348689 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 59552 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 615356 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 22408 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 596996 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 198548 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 218687 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 401085 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AF319547.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK010484.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK028274.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK031534.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK031679.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK147715.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK152989.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK155138.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK167603.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK168455.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK169255.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 AK170967.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 BC021900.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 BC043699.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 BC055026.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 BC062920.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 BC071251.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 923259 NM_028041.2 refseq_mrna_mouse_NM
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 319212 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 281417 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 907929 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 453585 AK047974.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 453585 M30514.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 453585 NM_009604.3 refseq_mrna_mouse_NM
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 453585 X03818.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 777265 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 940662 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 21422 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 19989 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 393052 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 93804 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 151297 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 930631 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 752059 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 796040 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 241942 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 924765 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 301114 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 565861 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 290563 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 679202 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 824458 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 603496 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 381038 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 82221 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 88933 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 116573 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 26145 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 17964 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 138497 - -
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P147879 - -
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P177061 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P09380211 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P09380080 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P177061 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P09380119 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P09380179 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P03729505 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P147879 - -
          Whole Mouse Genome G4122A A_52_P245806 L04961.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P245806 NR_001463.3 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P245806 NR_001570.2 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P245806 AK039861.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P245806 NR_002844.2 mouse_transcriptome
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P177061 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_67_P09380080 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_67_P03729505 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P147879 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572840 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P14513324 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572879 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572834 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P14860037 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P14770008 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572884 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572830 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P14770007 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572883 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572833 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572877 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572875 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572878 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P14598430 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572839 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572832 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572828 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572874 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P32572843 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix HT MG-430 PM Array Plate 1427596_PM_at - -
          Mouse Genome 430 2.0 Array 1427596_PM_at - -
          Mouse Genome 430 2.0 Array 1427596_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 22097_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 22097_at - -
          Affymetrix Mouse Clariom S Array PSR0X00006877.mm.1 TC0X00003398.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0X00006877.mm.1 NR_002844.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0X00006877.mm.1 NR_002844.2 Refseq
          Mouse Expression Set 430 1427596_at - -
          Mouse Expression Set 430 1427596_PM_at - -
          Mouse Genome 430A 2.0 Array 1427596_at - -
          Mouse Genome 430A 2.0 Array 1427596_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1427596_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1427596_at - -
          Array Name Probe IDs Targets Target Type
          MouseWG-6 v2 Expression BeadChip 100730026 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1256650 - -

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          Host server : magellan-search-666774c847-nqx77:80/100.66.134.75:80.
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