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- Gene Symbol:
-
Paf1 - Gene Name:
- Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
- Gene Aliases:
- 5730511K23Rik, AA675045
- Chromosome Location:
- Chr.7: 28392996 - 28399383 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Paf1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_019458.3 | NP_062331.2 | 12 - 13 | 1307 | 64 | |
| GenBank mRNA | AB041615.1 | - | 12 - 13 | 1325 | 64 | |
| AK017762.1 | - | 12 - 13 | 1377 | 64 | ||
| AK134857.1 | - | 12 - 13 | 1320 | 64 | ||
| AK148538.1 | - | 12 - 13 | 1342 | 64 | ||
| AK151665.1 | - | 12 - 13 | 1353 | 64 | ||
| AK152778.1 | - | 12 - 13 | 1323 | 64 | ||
| AK152836.1 | - | 12 - 13 | 1353 | 64 | ||
| BC010317.1 | - | 11 - 12 | 1351 | 64 | ||
| BC029843.1 | - | 12 - 13 | 1307 | 2651081 | 64 | |
| BC083337.1 | - | 12 - 13 | 1288 | 5701517 | 64 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0700000498.mm.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Mus musculus
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
endodermal cell fate commitment
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA polyadenylation
histone monoubiquitination
Wnt signaling pathway
nucleosome positioning
stem cell population maintenance
positive regulation of histone methylation
positive regulation of mRNA 3'-end processing
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
protein localization to nucleus
negative regulation of myeloid cell differentiation
positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide
RNA polymerase II complex binding
chromatin binding
protein binding
negative regulation of transcription by RNA polymerase II
endodermal cell fate commitment
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA polyadenylation
histone monoubiquitination
Wnt signaling pathway
nucleosome positioning
stem cell population maintenance
positive regulation of histone methylation
positive regulation of mRNA 3'-end processing
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
protein localization to nucleus
negative regulation of myeloid cell differentiation
positive regulation of transcription by RNA polymerase II
cellular response to lipopolysaccharide
RNA polymerase II complex binding
chromatin binding
protein binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021608 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021612 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021609 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021611 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021610 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 382617 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 618282 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 25845 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 295236 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 114826 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021608 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021635 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021631 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021623 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021610 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021627 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021621 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021630 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021622 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021638 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021613 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021628 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021625 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021620 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021618 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021616 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021615 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021609 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25021633 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P06149412 | - | - |
| Whole Mouse Genome G4122A | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | BC010317.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | BC029843.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | BC083337.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | AK152778.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P183995 | AK152836.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P6944 | BC010317.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P6944 | BC029843.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P6944 | BC083337.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P6944 | AK152778.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P6944 | AK148538.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P131781 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_67_P06149412 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P06250452 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P06250460 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021612 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021611 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021609 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021608 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P25021610 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021625 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021620 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021616 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021610 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021609 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021627 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021649 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021630 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021623 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021633 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021644 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021642 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021641 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021622 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021631 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021647 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021606 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021613 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021628 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021636 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021615 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25021618 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021630 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021644 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021642 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021620 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021622 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021641 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06232097 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021613 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021649 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021639 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06503669 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06001017 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021638 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021627 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05903954 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021631 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021636 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021621 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021615 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021607 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021623 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021625 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021640 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021647 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25021609 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10551508 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551500 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551499 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551501 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551498 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551505 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551502 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551510 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551507 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551509 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551506 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551503 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551497 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10551504 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1416874_PM_a_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10551496 | - | - |
| Mouse Genome 430 2.0 Array | 1416874_PM_a_at | - | - |
| Mouse Genome 430 2.0 Array | 1416874_a_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 54624_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 54624_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0700004047.mm.1 | TC0700000498.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700004047.mm.1 | NM_019458.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004047.mm.1 | NM_019458.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004049.mm.1 | TC0700000498.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700004049.mm.1 | NM_019458.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004049.mm.1 | NM_019458.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004050.mm.1 | TC0700000498.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700004050.mm.1 | NM_019458.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004050.mm.1 | NM_019458.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700004052.mm.1 | TC0700000498.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1416874_PM_a_at | - | - |
| Mouse Expression Set 430 | 1416874_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416874_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416874_PM_a_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416874_PM_a_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416874_a_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 6290593 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 780056 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 6290593 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0000780056 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0006290593 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2727445 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2744968 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2744968 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2727445 | - | - |
| mouse-6 v1.1 (Illumina) | scl054624.14_263-S | - | - |
| mouse-6 v1.1 (Illumina) | scl32870.5.1_13-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 6290593 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 780056 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl32870.5.1_13-S | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl054624.14_263-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 780056 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 6290593 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2972372 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2972371 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2744968 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2972371 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2972372 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2744968 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (3) | scl054624.14_263-S | - | - |
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