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- Gene Symbol:
-
LTA - Gene Name:
- lymphotoxin alpha
- Gene Aliases:
- LT, TNFB, TNFSF1, TNLG1E
- Chromosome Location:
- Chr.6: 31560550 - 31574324 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: LTA | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001159740.2 | NP_001153212.1 | 1 - 2 | 204 | 78 | |
| XM_011514615.2 | XP_011512917.1 | 4 - 5 | 1088 | 78 | ||
| XM_011514616.2 | XP_011512918.1 | 2 - 3 | 823 | 78 | ||
| XM_011514617.2 | XP_011512919.1 | 4 - 5 | 690 | 78 | ||
| XM_011514618.1 | XP_011512920.1 | 4 - 5 | 636 | 78 | ||
| GenBank mRNA | BP338937.1 | - | 1 - 2 | 204 | 78 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0600007595.hg.1This assay targets the same location as HTA transcript cluster(s) TC06000370.hg.1, TC6_cox_hap2000066.hg.1, TC6_dbb_hap3000057.hg.1, TC6_mann_hap4000058.hg.1, TC6_mcf_hap5000052.hg.1, TC6_qbl_hap6000057.hg.1, TC6_ssto_hap7000053.hg.1
Additional Information:
This assay is in the 5'UTR region of the NM_001159740.2, XM_011514615.2, XM_011514616.2, XM_011514617.2, XM_011514618.1 transcripts.
Set Membership: |
Amplicon length between 71 and 85
Detect Genomic DNA
Homo sapiens
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
response to hypoxia
positive regulation of chronic inflammatory response to antigenic stimulus
positive regulation of humoral immune response mediated by circulating immunoglobulin
apoptotic process
humoral immune response
signal transduction
cell-cell signaling
response to nutrient
response to xenobiotic stimulus
response to lipopolysaccharide
positive regulation of interferon-gamma production
tumor necrosis factor-mediated signaling pathway
positive regulation of apoptotic process
negative regulation of fibroblast proliferation
lymph node development
defense response to Gram-positive bacterium
positive regulation of glial cell proliferation
signaling receptor binding
cytokine activity
tumor necrosis factor receptor binding
response to hypoxia
positive regulation of chronic inflammatory response to antigenic stimulus
positive regulation of humoral immune response mediated by circulating immunoglobulin
apoptotic process
humoral immune response
signal transduction
cell-cell signaling
response to nutrient
response to xenobiotic stimulus
response to lipopolysaccharide
positive regulation of interferon-gamma production
tumor necrosis factor-mediated signaling pathway
positive regulation of apoptotic process
negative regulation of fibroblast proliferation
lymph node development
defense response to Gram-positive bacterium
positive regulation of glial cell proliferation
signaling receptor binding
cytokine activity
tumor necrosis factor receptor binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mann_hap4000891.hg.1 | TC6_mann_hap4000058.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mann_hap4000891.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003535.hg.1 | ENST00000454783.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003535.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003535.hg.1 | TC06000370.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mcf_hap5000750.hg.1 | TC6_mcf_hap5000052.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mcf_hap5000750.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_ssto_hap7000721.hg.1 | TC6_ssto_hap7000053.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_ssto_hap7000721.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mann_hap4000885.hg.1 | TC6_mann_hap4000058.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mann_hap4000885.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_cox_hap2000929.hg.1 | TC6_cox_hap2000066.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_cox_hap2000929.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003541.hg.1 | ENST00000454783.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003541.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06003541.hg.1 | TC06000370.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_dbb_hap3000878.hg.1 | TC6_dbb_hap3000057.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_dbb_hap3000878.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_qbl_hap6000910.hg.1 | TC6_qbl_hap6000057.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_qbl_hap6000910.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_qbl_hap6000916.hg.1 | TC6_qbl_hap6000057.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_qbl_hap6000916.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_ssto_hap7000727.hg.1 | TC6_ssto_hap7000053.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_ssto_hap7000727.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_dbb_hap3000872.hg.1 | TC6_dbb_hap3000057.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_dbb_hap3000872.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mcf_hap5000744.hg.1 | TC6_mcf_hap5000052.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR6_mcf_hap5000744.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007595.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151733.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151733.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151733.hg.1 | TC0600007595.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0600151733.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151733.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | NM_001159740.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | TC0600007595.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000418386.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000454783.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000471842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | ENST00000489638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | NM_000595.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600151740.hg.1 | NM_001159740.2 | Refseq |
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