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- Gene Symbol:
-
SLED1 - Gene Name:
- proteoglycan 3 pseudogene
- Gene Aliases:
- -
- Chromosome Location:
- Chr.4: 184798296 - 184799046 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: SLED1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003542.1 | 1 | 556 | 88 | ||
| GenBank mRNA | AY358224.1 | - | 1 | 556 | 88 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | centromere protein U | CENPU |
CENP50, CENPU50, KLIP1, MLF1IP, PBIP1 |
-64.2kb | Sense | Chr. 4 - 184694065 - 184734132 on NCBI Build GRCh38 |
| Downstream | MIR3945 host gene | MIR3945HG | 44.3kb | Sense | Chr. 4 - 184843296 - 184855652 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0400012622.hg.1This assay targets the same location as HTA transcript cluster(s) TC04001810.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P927716 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_24_P927716 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 6360 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 62203 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P927716 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_24_P927716 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845725 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684581 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845730 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684540 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684517 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684553 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684518 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684589 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684534 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845720 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684567 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845775 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845713 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845728 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684548 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684554 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845710 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845721 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684566 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845717 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684527 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684535 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684532 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845718 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684537 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684588 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684544 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845764 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845722 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684574 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845737 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684585 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684562 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845769 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845748 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845756 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845766 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684549 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684575 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845727 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684535 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684567 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845718 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845764 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684549 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684518 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845717 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845728 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684585 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845730 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684527 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845766 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684562 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684574 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684548 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845775 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684566 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845756 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684589 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845713 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684588 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684575 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684554 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845769 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845737 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684540 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845727 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684553 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845721 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684544 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845720 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684537 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684534 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684532 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684517 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P03684581 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845748 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845725 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845710 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P23845722 | - | - |
| Whole Human Genome Oligo Microarray G4112A | A_24_P927716 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_24_P927716 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684539 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684553 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684568 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684544 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684542 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684560 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684529 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684534 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684573 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684585 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684577 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684520 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684581 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684532 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684526 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684514 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684537 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684516 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684583 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684558 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684579 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684590 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684523 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684509 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684551 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684512 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684562 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684518 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684566 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684547 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684549 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P03684571 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15645901 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_003542_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8103976 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8103975 | - | - |
| Affymetrix Human Genome U219 Array | 11753498_at | - | - |
| Affymetrix Human Genome U219 Array | 11753498_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | ENST00000512051.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR04024703.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR04024703.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR04024703.hg.1 | TC04001810.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR0400186439.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186439.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400186439.hg.1 | TC0400012622.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0400186439.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400186439.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186441.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186441.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400186441.hg.1 | TC0400012622.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0400186441.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186441.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | ENST00000512051.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0400012622.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | ENST00000512051.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | NR_003542.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | TC0400012622.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | ENST00000506741.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | ENST00000512051.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400186440.hg.1 | NR_003542.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A025073 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A025073 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1673322 | AY358224.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1673322 | NR_003542.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1673322 | AY358224.1 | human_transcriptome |
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