Assay Details

Gene Symbol: NOD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006092.2	NP_006083.1	1 - 2	167		69
	XM_005249572.1	XP_005249629.1	1 - 2	174		69
	XM_017011675.1	XP_016867164.1	1 - 2	128		69
GenBank mRNA	AF113925.1	-	1 - 2	39		69
	AF126484.1	-	1 - 2	95		69
	AK023969.1	-	1 - 2	128		69
	AK300367.1	-	1 - 2	86		69
	AY128682.1	-	1 - 2	26		69
	AY128683.1	-	1 - 2	26		69
	BC040339.1	-	1 - 2	82	4338930	69
	CV569884.1	-	1 - 2	167		69

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700010637.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001249.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF113925.1, AF126484.1, AK023969.1, AK300367.1, AY128682.1, AY128683.1, BC040339.1, NM_006092.2, XM_005249572.1, XM_017011675.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NOD1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07019443.hg.1	ENST00000222823.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019443.hg.1	ENST00000423334.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019443.hg.1	NM_006092.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07019443.hg.1	TC07001249.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07019445.hg.1	ENST00000222823.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019445.hg.1	NM_006092.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07019445.hg.1	TC07001249.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07019442.hg.1	ENST00000222823.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019442.hg.1	ENST00000423334.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019442.hg.1	NM_006092.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07019442.hg.1	TC07001249.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07019448.hg.1	ENST00000222823.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019448.hg.1	NM_006092.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07019448.hg.1	TC07001249.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07019438.hg.1	ENST00000222823.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019438.hg.1	ENST00000423334.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07019438.hg.1	NM_006092.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07019438.hg.1	TC07001249.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	TC0700010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175600.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	TC0700010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175604.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	TC0700010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175601.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000413433.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	TC0700010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000413433.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175595.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000413433.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	NM_006092.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	TC0700010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000222823.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000411552.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000413433.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000419601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000419799.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	ENST00000434755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700175599.hg.1	NM_006092.3	Refseq

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Catalog #	4351372
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Genomic Map