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          • Home
          • › Search Tool
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          • › Rn01439519_m1
          See other VCP GE Assays ›
          Gene Symbol:
          Vcp
          Gene Name:
          valosin-containing protein
          Gene Aliases:
          -
          Chromosome Location:
          Chr.5: 58426548 - 58445953 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01439519_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Vcp
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053864.2 NP_446316.1 15 - 16 2372 65
          GenBank mRNA BC060518.1 - 15 - 16 2372 65
          U11760.1 - 15 - 16 2404 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500002599.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Vcp

          Gene Ontology Categories:

          Function(s) Process(es)

          double-strand break repair
          ubiquitin-dependent protein catabolic process
          endoplasmic reticulum to Golgi vesicle-mediated transport
          activation of cysteine-type endopeptidase activity involved in apoptotic process
          cellular response to DNA damage stimulus
          protein ubiquitination
          protein N-linked glycosylation via asparagine
          translesion synthesis
          ubiquitin-dependent ERAD pathway
          retrograde protein transport, ER to cytosol
          positive regulation of protein-containing complex assembly
          positive regulation of proteasomal ubiquitin-dependent protein catabolic process
          protein hexamerization
          positive regulation of protein catabolic process
          protein homooligomerization
          aggresome assembly
          positive regulation of protein K63-linked deubiquitination
          positive regulation of Lys63-specific deubiquitinase activity
          RNA binding
          signaling receptor binding
          protein binding
          ATP binding
          lipid binding
          ATP hydrolysis activity
          protein phosphatase binding
          protein domain specific binding
          polyubiquitin modification-dependent protein binding
          deubiquitinase activator activity
          identical protein binding
          ADP binding
          protein-containing complex binding
          ubiquitin-specific protease binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P156433 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 665759 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 350272 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 338693 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 664087 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 488714 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 845452 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 82371 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 151916 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 514851 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 361408 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 969970 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 408890 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 757170 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 893935 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 147263 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 57500 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 137743 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P156433 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P156433 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P156433 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P156433 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700145748 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 5402 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 77719 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 30776 - -
          Agilent Rat cDNA Microarray (G4105A) 700145748 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10876237 - -
          Affymetrix Rat Gene 1.0 ST Array 10876240 - -
          Affymetrix Rat Gene 1.0 ST Array 10876227 - -
          Affymetrix Rat Gene 1.0 ST Array 10876235 - -
          Affymetrix Rat Gene 1.0 ST Array 10876232 - -
          Affymetrix Rat Gene 1.0 ST Array 10876226 - -
          Affymetrix Rat Gene 1.0 ST Array 10876229 - -
          Affymetrix Rat Gene 1.0 ST Array 10876228 - -
          Affymetrix Rat Gene 1.0 ST Array 10876239 - -
          Affymetrix Rat Gene 1.0 ST Array 10876231 - -
          Affymetrix Rat Gene 1.0 ST Array 10876241 - -
          Affymetrix Rat Gene 1.0 ST Array 10876234 - -
          Affymetrix Rat Gene 1.0 ST Array 10876233 - -
          Affymetrix Rat Gene 1.0 ST Array 10876236 - -
          Affymetrix Rat Gene 1.0 ST Array 10876230 - -
          Affymetrix Rat Gene 1.0 ST Array 10876225 - -
          Affymetrix Rat Gene 1.0 ST Array 10876238 - -
          Affymetrix Rat Gene 1.1 ST Array 10876224 - -
          Rat Genome 230 2.0 Array 1367455_at - -
          Rat Genome 230 2.0 Array 1367455_PM_at - -
          Affymetrix HT Rat Focus Array 1367455_PM_at - -
          Affymetrix HT Rat Focus Array 1367455_at - -
          Affymetrix Rat Clariom S Assay PSR0500019217.rn.1 TC0500002599.rn.1 RTA TC
          Rat Expression Set 230 1367455_at - -
          Rat Expression Set 230 1367455_PM_at - -
          Rat Expression Set 230 1367455_at - -
          Rat Expression Set 230 1367455_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10876224 - -
          Rat Genome U34 Set rc_AI044341_s_at - -
          Rat Genome U34 Set U11760_at - -
          Rat Genome U34 Set rc_AI059675_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21583527 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363637 - -
          RatRef-12 Expression BeadChip ILMN_62115 - -

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          Host server : magellan-search-858577f6d7-97zpv:80/100.66.134.49:80.
          git-commit: 8a4c7f5d60a2609f21a9257632c46d3db2b553cc
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.34.0-2025.08.32-1.0