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- Gene Symbol:
-
Pax5 - Gene Name:
- paired box 5
- Gene Aliases:
- RGD1565236
- Chromosome Location:
- Chr.5: 60007587 - 60191973 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Pax5 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001109261.1 | NP_001102731.1 | 1 - 2 | 78 | 79 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0500002651.rn.1Set Membership: |
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
skeletal muscle cell differentiation
positive regulation of transcription by RNA polymerase II
negative regulation of histone H3-K9 methylation
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
DNA-binding transcription factor activity
negative regulation of transcription by RNA polymerase II
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
skeletal muscle cell differentiation
positive regulation of transcription by RNA polymerase II
negative regulation of histone H3-K9 methylation
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
DNA-binding transcription factor activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P064099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 712504 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613444 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 667423 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 323453 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 937597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432629 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 153077 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 261047 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 471715 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 675144 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 636626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 138374 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 19140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 107900 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745033 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388012 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 458987 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 640583 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 52553 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109346 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 20655 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390902 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 136344 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 903981 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 371238 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 656458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 764115 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 740539 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 973492 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 740102 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 822716 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 60434 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 809837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 772883 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328951 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 524701 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 545626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 292228 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 782515 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 700695 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 763473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 656683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 351992 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 847433 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 446447 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 178441 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 332018 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256150 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 752156 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 635246 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 67372 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 194115 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 72920 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 1708 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 585982 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 67250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 471269 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 356486 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 178143 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 882254 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 524406 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 222443 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 88048 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 515729 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 953568 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 266489 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 560583 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 404266 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 652025 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 319613 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 810738 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 240001 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 283085 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 901593 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 274878 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 172413 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 890464 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 868098 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 119402 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 713716 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 457398 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 344443 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749675 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 121747 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 116035 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 84498 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 131958 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 58794 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 80179 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 55398 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 164964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 166863 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 151119 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 76417 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148998 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 165113 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P064099 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P064099 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P064099 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 86296 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10876498 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876500 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10876497 | - | - |
| Affymetrix Rat Clariom S Assay | PSR0500019756.rn.1 | TC0500002651.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500019755.rn.1 | TC0500002651.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500019754.rn.1 | TC0500002651.rn.1 | RTA TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20889259 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1372098 | - | - |
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