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- Gene Symbol:
-
Ocln - Gene Name:
- occludin
- Gene Aliases:
- -
- Chromosome Location:
- Chr.2: 30527327 - 30577218 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Ocln | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_031329.2 | NP_112619.2 | 5 - 6 | 1192 | 86 | |
| XM_006231853.2 | XP_006231915.1 | 5 - 6 | 1188 | 86 | ||
| XM_006231854.2 | XP_006231916.1 | 5 - 6 | 1232 | 86 | ||
| XM_006231855.2 | XP_006231917.1 | 4 - 5 | 1112 | 86 | ||
| GenBank mRNA | BC062037.1 | - | 5 - 6 | 1192 | 86 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200002736.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
methylation
cell-cell junction organization
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
bicellular tight junction assembly
structural molecule activity
thiopurine S-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
protein domain specific binding
methylation
cell-cell junction organization
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
bicellular tight junction assembly
structural molecule activity
thiopurine S-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
protein domain specific binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P107229 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 791377 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 19316 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 898209 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 777627 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874340 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 798323 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 881109 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 909694 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 216433 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 294820 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 951237 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 165268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 255099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 480466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 322512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 840123 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895430 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 806409 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 22516 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 554978 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 821538 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 972214 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 161239 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 173522 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 434557 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 188356 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 555978 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 51484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704041 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 804513 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 885311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 152784 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 737108 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 813464 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 391090 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327647 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 797774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 244400 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 439280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 459824 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 634748 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 168124 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 171899 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 177792 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152883 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 45468 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P107229 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P107229 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P107229 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P12552 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P1007729 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 101012 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 15389 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 17763 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10820954 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820960 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820955 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820962 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820956 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820958 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820957 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820959 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820961 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10820953 | - | - |
| Rat Genome 230 2.0 Array | 1398281_at | - | - |
| Rat Genome 230 2.0 Array | 1378753_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1398281_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1378753_at | - | - |
| Affymetrix HT Rat Focus Array | 1398281_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1378753_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1378753_at | - | - |
| Affymetrix HT Rat Focus Array | 1398281_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200019270.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019279.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019273.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019296.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019274.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019276.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019283.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019284.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019285.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019286.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019271.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019277.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019282.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019287.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019272.rn.1 | TC0200002736.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200019280.rn.1 | TC0200002736.rn.1 | RTA TC |
| Rat Expression Set 230 | 1398281_PM_at | - | - |
| Rat Expression Set 230 | 1378753_at | - | - |
| Rat Expression Set 230 | 1378753_PM_at | - | - |
| Rat Expression Set 230 | 1398281_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10820953 | - | - |
| Rat Genome U34 Set | rc_AI638971_g_at | - | - |
| Rat Genome U34 Set | rc_AI638971_at | - | - |
| Rat Genome U34 Set | AB016425_at | - | - |
| Rat Genome U34 Set | rc_AI232537_f_at | - | - |
| Rat Genome U34 Set | rc_AI179441_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21989876 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1360561 | - | - |
| RatRef-12 Expression BeadChip | ILMN_69899 | - | - |
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