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          • › Rn00573260_m1
          See other CXCL12 GE Assays ›
          Gene Symbol:
          Cxcl12
          Gene Name:
          chemokine (C-X-C motif) ligand 12
          Gene Aliases:
          Sdf1
          Chromosome Location:
          Chr.4: 149261044 - 149273891 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00573260_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cxcl12
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001033882.1 NP_001029054.1 2 - 3 260 60
          NM_001033883.1 NP_001029055.1 2 - 3 260 60
          NM_022177.3 NP_071513.1 2 - 3 260 60
          GenBank mRNA AF189724.1 - 2 - 3 181 60
          AF209976.1 - 2 - 3 211 60
          AF217564.1 - 2 - 3 232 60
          BC078737.1 - 2 - 3 259 7128141 60
          CK475409.1 - 2 - 3 260 60
          CV081127.1 - 2 - 3 227 60

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0400001646.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus Rat Chemokine Panel Rat Tumor Metastasis Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cxcl12

          Gene Ontology Categories:

          Function(s) Process(es)

          patterning of blood vessels
          response to hypoxia
          ameboidal-type cell migration
          neuron migration
          positive regulation of endothelial cell proliferation
          immune response
          germ cell development
          brain development
          motor neuron axon guidance
          positive regulation of cell proliferation
          adult locomotory behavior
          germ cell migration
          response to radiation
          response to heat
          response to mechanical stimulus
          cell migration
          telencephalon cell migration
          regulation of cell migration
          positive regulation of cell migration
          organ regeneration
          positive regulation of dopamine secretion
          T cell proliferation
          response to peptide hormone
          positive regulation of neuron differentiation
          positive regulation of cell adhesion
          positive regulation of axon extension involved in axon guidance
          induction of positive chemotaxis
          regulation of calcium ion transport
          cell chemotaxis
          chemokine-mediated signaling pathway
          positive regulation of monocyte chemotaxis
          positive regulation of myoblast fusion
          negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
          negative regulation of leukocyte tethering or rolling
          negative regulation of leukocyte apoptotic process
          positive regulation of T cell migration
          chemokine activity
          chemokine receptor binding
          CXCR chemokine receptor binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P337351 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P135474 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 724310 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 400358 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 273812 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 271954 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 943240 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 507685 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 861493 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 959359 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 199960 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 723927 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 150866 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 22006 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P135474 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P337351 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P337351 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P135474 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P337351 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P135474 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P337351 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1034439 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 23585 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10858167 - -
          Affymetrix Rat Gene 1.0 ST Array 10858171 - -
          Affymetrix Rat Gene 1.0 ST Array 10858169 - -
          Affymetrix Rat Gene 1.0 ST Array 10858168 - -
          Affymetrix Rat Gene 1.0 ST Array 10858173 - -
          Affymetrix Rat Gene 1.0 ST Array 10858166 - -
          Affymetrix Rat Gene 1.0 ST Array 10858172 - -
          Affymetrix Rat Gene 1.0 ST Array 10858170 - -
          Affymetrix Rat Gene 1.1 ST Array 10858165 - -
          Rat Genome 230 2.0 Array 1387655_at - -
          Rat Genome 230 2.0 Array 1369633_PM_at - -
          Rat Genome 230 2.0 Array 1388583_at - -
          Rat Genome 230 2.0 Array 1369633_at - -
          Rat Genome 230 2.0 Array 1388583_PM_at - -
          Rat Genome 230 2.0 Array 1387655_PM_at - -
          Affymetrix HT Rat Focus Array 1369633_at - -
          Affymetrix HT Rat Focus Array 1388583_PM_at - -
          Affymetrix HT Rat Focus Array 1369633_PM_at - -
          Affymetrix HT Rat Focus Array 1388583_at - -
          Affymetrix HT Rat Focus Array 1387655_at - -
          Affymetrix HT Rat Focus Array 1387655_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0400011707.rn.1 TC0400001646.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400011708.rn.1 TC0400001646.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400011712.rn.1 TC0400001646.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400011711.rn.1 TC0400001646.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400011709.rn.1 TC0400001646.rn.1 RTA TC
          Rat Expression Set 230 1388583_at - -
          Rat Expression Set 230 1387655_at - -
          Rat Expression Set 230 1388583_PM_at - -
          Rat Expression Set 230 1369633_at - -
          Rat Expression Set 230 1369633_PM_at - -
          Rat Expression Set 230 1387655_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10858165 - -
          Rat Genome U34 Set rc_AA957391_f_at - -
          Rat Genome U34 Set rc_AA818747_at - -
          Rat Genome U34 Set rc_AI232340_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22408561 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351603 - -
          RatRef-12 Expression BeadChip ILMN_70164 - -

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          Host server : magellan-search-89bfcd4dd-zgn5p:80/100.66.134.75:80.
          git-commit: f1ed3cb73da2dc18796bd96aca0ec275a318700b
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.33.0-2025.07.30-1.0