Name: [Hs03298690_s1] [SNORA80E]
Creator: Thermo Fisher Scientific
Keywords: [SNORA80E] Assay, [small nucleolar RNA, H/ACA box 80E] Assay

Assay Details

Gene Symbol: SNORA80E
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002974.1		1	70		76
GenBank mRNA	AJ609465.1	-	1	70		76

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BU663871.1	-		85	Chr. - - [-] on Build	76
GenBankmRNA	DW418843.1	-	1	90	Chr. 1 - 155918992 - 155920049 [-] on Build GRCh38	76
GenBankmRNA	BX482452.1	-	1		Chr. 1 - 155919536 - 155920080 [+] on Build GRCh38	76
GenBankmRNA	DW454448.1	-	1	91	Chr. 1 - 155919883 - 155920049 [-] on Build GRCh38	76

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	KIAA0907	KIAA0907	BLOM7		Sense	Chr. 1 - 155913043 - 155934442 on NCBI Build GRCh38
Downstream	small Cajal body-specific RNA 4	SCARNA4	ACA26	5.9kb	Sense	Chr. 1 - 155925958 - 155926086 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015977.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003326.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_3978	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583925	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583915	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583914	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525631	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583919	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525629	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583909	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583906	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525649	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583928	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525641	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583926	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583922	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583923	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525627	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583927	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583908	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15132665	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583909	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525649	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583923	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583915	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525631	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583927	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15132665	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583922	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583926	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583914	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583928	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583925	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583919	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525627	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525641	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583906	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00525629	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20583908	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525636	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525632	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525577	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525562	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525634	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525654	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525572	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525574	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525673	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525566	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525628	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525649	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525642	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525624	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525666	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525664	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525647	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525668	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525638	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525670	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15132665	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525644	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525568	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525625	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525651	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15132667	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525655	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525579	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15132654	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525676	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525570	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525641	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525658	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00525646	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	NR_002974_at	-	-
Affymetrix Human Gene 1.0 ST Array	7920874	-	-
Affymetrix Human Gene 1.1 ST Array	7920873	-	-
Affymetrix Human Genome U219 Array	11763913_PM_at	-	-
Affymetrix Human Genome U219 Array	11763913_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC0100015977.hg.1	ENST00000384744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015977.hg.1	NR_002974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01051739.hg.1	ENST00000384744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01051739.hg.1	NR_002974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01051739.hg.1	TC01003326.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100220861.hg.1	ENST00000384744.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100220861.hg.1	NR_002974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100220861.hg.1	TC0100015977.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100220861.hg.1	NR_002974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100220861.hg.1	ENST00000384744.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015977.hg.1	ENST00000384744.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015977.hg.1	NR_002974.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3248575	NR_002974.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3248575	AJ609465.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3248575	NR_002974.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3248575	AJ609465.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3248575	NR_002974.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3248575	AJ609465.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3248575	NR_002974.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3248575	AJ609465.1	human_transcriptome

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map