BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System with EmGFP
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Invitrogen™

BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System with EmGFP

The BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System with EmGFP combines Invitrogen's BLOCK-iT™ Pol II miR RNAi and ViraPower™Read more
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Catalog number K493800
Price (USD)
3,510.00
Each
Add to cart
Price (USD)
3,510.00
Each
Add to cart
The BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System with EmGFP combines Invitrogen's BLOCK-iT™ Pol II miR RNAi and ViraPower™ Lentiviral technologies to facilitate creation of a replication-incompetent lentivirus that delivers a microRNA (miRNA) sequence of interest to dividing or non-dividing mammalian cells for RNA interference (RNAi) analysis thus broadening the potential RNAi applications beyond those of other traditional retroviral systems (Naldini, 1998). The BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System with EmGFP includes: o A BLOCK-iT™ Pol II miR RNAi Expression Vector Kit for production of an expression clone containing a double-stranded oligonucleotide encoding a pre-miRNA sequence for expression in mammalian cells. The BLOCK-iT™ Pol II miR RNAi Expression Vector (pcDNA™6.2-GW/ EmGFP-miR) provides a rapid and efficient way to clone ds oligo duplexes encoding a desired miRNA target sequence into a vector containing a Pol II promoter (CMV) for use in RNAi analysis. The BLOCK-iT™ Pol II miR RNAi Expression Vector is specifically designed to allow expression of miRNA sequences and contain specific miR flanking sequences that allow proper processing of the miRNA. o Co-cistronic expression of an Emerald GFP (EmGFP) reporter in the pcDNA™6.2-GW/EmGFP-miR vector, resulting in very strong correlation of EmGFP expression with the knockdown activity of your miRNA o The pDONR™221 vector to transfer the premiRNA expression cassette into the lentiviral expression plasmid using Gateway™ Technology. The Gateway™ Technology is a universal cloning method that takes advantage of the site-specific recombination properties of bacteriophage lambda (Landy, 1989) to provide a rapid and highly efficient way to move your DNA sequence of interest into multiple vector systems. o A pLenti6/V5-DEST destination vector into which the pre-miRNA cassette from the expression clone is transferred using Gateway™ Technology.This expression plasmid contains elements that allow packaging of the construct into virions and the Blasticidin resistance marker for selection of stably transduced cell lines. o Gateway™ BP and LR Clonase™ II Enzyme Mixes that facilitate the transfer of the pre-miRNA expression cassette from the expression vector into the pLenti6/V5-DEST destination vector. o Components of the ViraPower™ Lentiviral System for production of a replication-incompetent lentivirus that stably expresses the miRNA of interest in both dividing and non-dividing mammalian cells. The ViraPower™ Lentiviral Technology facilitates highly efficient, in vitro or invivo delivery of a target gene or RNA to dividing and non-dividing mammalian cells using a replication-incompetent lentivirus. Based on the lentikat™ systemdeveloped by Cell Genesys (Dull et al., 1998), the ViraPower™ LentiviralTechnology possesses features which enhance its biosafety while allowing highlevel expression in a wider range of cell types than traditional retroviral systems.
For Research Use Only. Not for use in diagnostic procedures.
Specifications
Product TypeRNAi Expression Vector Kit
GeneGFP (EmGFP)
Cloning MethodGateway™
Constitutive or Inducible SystemConstitutive
Delivery TypeLentiviral
RNAi TypemiRNA
Selection Agent (Eukaryotic)Blasticidin
VectorpLenti
PromoterCMV
Product LineBLOCK-iT™, Gateway™
Quantity20 reactions
Unit SizeEach
Contents & Storage
The BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System withEmGFP contains either the BLOCK-iT™ Pol II miR RNAi ExpressionVector Kit which contains two boxes. The cloning box containslinearized pcDNA™6.2-GW⁄EmGFP-miR, 10X annealing buffer, T4 DNALigase, 5X DNA Ligation buffer, lacZ control oligo, lacZ controlplasmid, negative control plasmid, DNase/RNase-free water, and forwardand reverse sequencing primers. Store the vectors, buffers, controloligo and plasmids, water, and sequencing primers at -20°C.The One Shot™ box contains transformation reagents includingtwenty-one 50-μl aliquots of One Shot™ TOP10 ChemicallyCompetent E. coli, S.O.C. medium, and a pUC19 supercoiled controlplasmid. Store these transformation reagents -80°C. Allreagents are guaranteed stable for 6 months when properly stored.

The BLOCK-iT™ Lentiviral Pol II miR RNAi Expression System withEmGFP also includes all the necessary reagents for Gateway™ cloninginto the lentiviral expression system, including: pLenti6⁄V5-DESTVector, pLenti6-V5⁄GW-lacZ control, pDONR™221, ViraPower™Lentiviral Bsd Support Kit (ViraPower™ Packaging Mix,Lipofectamine™ 2000 transfection reagent, and Blasticidin), 293FTCell Line, One Shot™ Stbl3™ Chemically Competent E. coli, OneShot™ TOP10 Chemically Competent E. coli, and Gateway™ LR andBP Clonase™ II Enzyme Mixes. Store the Lipofectamine™ 2000reagent at +4°C (do not freeze). Store the vectors,ViraPower™ Packaging Mix, Blasticidin, and both Clonase™ IIEnzyme Mixes at -20°C. Store the competent cells at-80°C. Store the 293FT Cell Line in liquid nitrogen. Allreagents are guaranteed stable for 6 months when properly stored.

Frequently asked questions (FAQs)

How large of a PCR product can I recombine with a pDONR vector via BP cloning? Does the same apply for TOPO-adapted Entry vectors?

There is no theoretical limit to insert size for a BP reaction with a pDONR vector. Maximum size tested in-house is 12 kb. TOPO vectors are more sensitive to insert size and 3-5 kb is the upper limit for decent cloning efficiency.

How should I clean up my attB-PCR product?

After generating your attB-PCR product, we recommend purifying it to remove PCR buffer, unincorporated dNTPs, attB primers, and any attB primer-dimers. Primers and primer-dimers can recombine efficiently with the Donor vector in the BP reaction and may increase background after transformation into E. coli, whereas leftover PCR buffer may inhibit the BP reaction. Standard PCR product purification protocols using phenol/chloroform extraction followed by ammonium acetate and ethanol or isopropanol precipitation are not recommended for purification of the attB-PCR product as these protocols generally have exclusion limits of less than 100 bp and do not efficiently remove large primer-dimer products. We recommend a PEG purification protocol (see page 17 of the Gateway Technology with Clonase II manual). If you use the above protocol and your attB-PCR product is still not suitably purified, you may further gel-purify the product. We recommend using the PureLink Quick Gel Extraction kit.

I'm trying to propagate my Gateway destination vector and am not seeing any colonies. What should I do?

Check the genotype of the cell strain you are using. Our Gateway destination vectors typically contain a ccdB cassette, which, if uninterrupted, will inhibit E. coli growth. Therefore, un-cloned vectors should be propagated in a ccdB survival cell strain, such as our ccdB Survival 2 T1R competent cells.

What is the difference between LR Clonase II and LR Clonase II Plus?

LR Clonase II Plus contains an optimized formulation of recombination enzymes for use in MultiSite Gateway LR reactions. LR Clonase and LR Clonase II enzyme mixes are not recommended for MultiSite Gateway LR recombination reactions, but LR Clonase II Plus is compatible with both multi-site and single-site LR recombination reactions.

What are the benefits of the BLOCK-iT miR RNAi expression system over similar systems?

The BLOCK-iT miR RNAi expression system allows you to take advantage of promoter flexibility by choosing from a variety of Pol II promoters like CMV, Ubc, tissue specific, or inducible promoters. The miRNA vectors also allow you to clone multiple sequences in the same vector, thereby enabling you to target more than one gene or more than one location in a gene using a single plasmid. An additional advantage offered by some of the miRNA expression vectors is that transfection efficiency can be monitored with the EmGFP fusion partner.

Find additional tips, troubleshooting help, and resources within our RNAi Support Center.