PureQuant™ Treg Assay
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PureQuant™ Treg Assay
Applied Biosystems™

PureQuant™ Treg Assay

The Applied Biosystems PureQuant assays are a family of assays that accurately identify and quantify specific immune cell types inRead more
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Catalog number A43675
Price (USD)
4,115.00
Each
Add to cart
Price (USD)
4,115.00
Each
Add to cart
The Applied Biosystems PureQuant assays are a family of assays that accurately identify and quantify specific immune cell types in a mixed population of cells. These assays are TaqMan qPCR-based and measure genomic DNA methylation at specific sites that serve as a unique identifier. The assays include standards and controls and each 96-well plate can accommodate up to seven test samples. Results are provided as a percentage of target cell type out of total input cells using a free analysis tool.

The PureQuant Treg Assay utilizes a specific demethylated site in the transcription factor FOXP3 gene to positively identify regulatory T-cells. This specific site allows for discrimination of regulatory T-cells from activated CD4+ FOXP3+ conventional T-cells (see https://onlinelibrary.wiley.com/doi/full/10.1002/eji.200737594).

Benefits include:
Proven performance―core technology has been used for identification and quantification of immune cell types for over a decade
Easily standardized―qPCR method enables consistent results across multiple users, instruments, and sites
Facilitates regulatory filings―established performance specifications following ICHQ2(R1) guidelines
Scheduling flexibility―assay can be performed using fresh or frozen cells/gDNA

The assays include all reagents, standards, and controls required to run the assay. Specific components include:
Calibrator: corrects for variation in bisulfite conversion efficiency. Plasmid-based calibrator harbors the genomic target regions in equimolar ratios and includes GAPDH. Subjected to bisulfite conversion followed by copy number estimation via qPCR standard curve. Allows estimation of assay-specific bisulfite efficiency factor: the ratio between TpG/GAPDH copy numbers measured from the same plasmid.
Reference: checks assay performance. Consists of genomic DNA extracted from human blood of pooled healthy donors. The reference values represent the expected range of the target cell type. For example, CD8+ cells are generally more abundant than Treg or Th17 cells.
Standards: determine the unknown copy number. Consist of six dilutions spanning 4-log linear dynamic range (30-31250 copies). Absolute copy numbers can reliably be determined using the slope and intercept of the respective standard curves.

This product is manufactured at a site with an ISO9001-certified quality management system.
For Research Use or Manufacturing of Cell, Gene, or Tissue-Based Products. CAUTION: Not intended for direct administration into humans or animals.
Specifications
Detection MethodPrimer-Probe Detection
For Use With (Application)Cells, DNA
Quantity28 reactions
Shipping ConditionApproved for shipment at Room Temperature or on Wet or Dry Ice
Unit SizeEach
Contents & Storage
  • Dynabeads SILANE Genomic DNA Kit, store at 2°C to 8°CC
  • 1 x 2 mL PureQuant qPCR Master Mix, store at 2°C to 8°CC
  • 4 x ABS
  • THFA, store at room temperature
  • PureQuant Treg Module, store at -15 to -25°C (FOXP3 & GAPDH TaqMan primers and probes, Reference DNA, Lambda DNA, Standard DNA)

Frequently asked questions (FAQs)

What is the passive reference in the PureQuant qPCR Master Mix that is included in the PureQuant Treg Assay (Cat. No. A43675)?

ROX is the passive reference.

Find additional tips, troubleshooting help, and resources within our Real-Time PCR and Digital PCR Applications Support Center.

In the PureQuant assays, can I make changes to the data analysis template?

No, the template is locked and no changes can be made to the formulas and calculations. In the event of a bad/outlier replicate (or replicates), consult the instruction tab of the template for guidance on performing analysis in these cases.

If I am new to the PureQuant technology, do you have a suitable product that I can use as an orthogonal method for comparison?

Yes, we've developed the corresponding eBioscience Essential Phenotyping kits for flow cytometry characterization of T cells, regulatory T cells, and type 1 and type 17 T helper cells. These kits were used during the development of the PureQuant CD8+, Treg, and Th17 Assays.

Can alternative bisulfite conversion kits or reagents (for example sodium bisulfite) be used for bisulfite conversion?

No, the bisulfite conversation kit was optimized specifically for the PureQuant Assays. The ammonium bisulfite and THFA were selected from specific suppliers and using alternatives will jeopardize performance of the assays.

Do the PureQuant assays require specific qPCR instrumentation to run?

No. The assays have been demonstrated to work on Thermo Fisher qPCR instrumentation and other competitor platforms. The only requirement is that the instrument must be compatible with FAM and non-fluorescent quencher or their respective equivalents.