GeneMapper™ Software 6, full installation
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Applied Biosystems™

GeneMapper™ Software 6, full installation

GeneMapper Software is a flexible genotyping software package that provides DNA sizing and quality allele calls for all Thermo FisherRead more
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Catalog number A38888
Price (USD)
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GeneMapper Software is a flexible genotyping software package that provides DNA sizing and quality allele calls for all Thermo Fisher Scientific electrophoresis-based genotyping systems. This software specializes in multi-application functionality, including amplified fragment length polymorphism (AFLP), loss of heterozygosity (LOH), microsatellite and SNP genotyping analysis. GeneMapper Software can help users increase data processing efficiency with remote auto-analysis and command line operation, and allows for multiuser, client-server deployment. The software uses Process Quality Values (PQVs) for automated identification that reduces data review time for high throughput genotyping. In addition, the security and audit features help users meet 21 CFR 11 requirements.

Register to download a previous Windows 7-compatible trial version of this software ›

Features include:

• Installation on the data collection computer or a non-instrument computer
• Support of networked multiple clients when installed on a non-instrument computer
• An Oracle 11g database with project-related data storage that ensures faster installation times and latest database support, as well as flexible archive capabilities
• Customizable project auto-saving frequency
• Defining of linearity range in the analysis methods for more reproducible, higher quality sizing of larger fragments (>800bps)
• Analysis of 6-dye data generated from the Applied Biosystems 3500 and 3500xL instrument systems for higher multiplexing capabilities

GeneMapper Software has not undergone specific developmental validation for human identification applications. Human identification laboratories analyzing single-source or parentage samples that choose to use GeneMapper Software for data analysis should perform their own developmental validation studies.

Several users may access the database concurrently; however, because genotype analysis is data-intensive, more than five clients simultaneously accessing the database may slow the performance of GeneMapper Software.

Recommended Computer Configuration: Dell OptiPlex XE2, 7-4770S Intel Processor (Quad Core HT, 3.10GHz Turbo, 8MB), 16GB (2x8GB) 1600MHz DDR3. Supported Operating Systems: Windows™ 7 Professional Service Pack 1 32-bit, Windows 10 Pro/IoT.
Specifications
Product LineGeneMapper™
Software TypeCE Fragment Analysis
Data EntryCE Fragment Analysis (.fsa files)
LicenseFull
Operating SystemWindows 10 Pro/IoT, Windows 7 Pro Service Pack 1
Product TypeGeneMapper Software 6 Full Installation
Quantity1 license
Software CategorySupports files from all AB Genetic Analyzers
Unit SizeEach
Contents & Storage
Software/DVD

Frequently asked questions (FAQs)

How can I set up auto-analysis for data in GeneMapper with the 3500 Data Collection Software version 3.x?

Beginning with 3500 Data Collection Software version 3, the 3500 Data Collection Software does not support automatic secondary analysis. This is also indicated in the software release notes. To perform secondary data analysis, you will need to manually import the .fsa file into the GeneMapper software. For optimal performance, we recommend that you install the GeneMapper Software on a stand-alone computer that is not part of the 3500 Genetic Analyzer system.

Find additional tips, troubleshooting help, and resources within our Fragment Analysis Software Support Center.

How do I uninstall GeneMapper 6 Software?

Instructions to uninstall GeneMapper software can be found on page 33 of the GeneMapper 6 Software - Installation User Guide
Reboot the computer after uninstalling and complete the following prior to reinstall:
1. Disconnect network cable
2. Turn off all antivirus programs
3. Login locally with admin rights
If the firewall settings are unable to be disabled, perform the following:
Modify below registry key before installation. EnableFirewall value should be made as 0 in order to proceed with installation.
Once installation is completed user can revert EnableFirewall to 1
From the Start button enter "REGEDIT" in the Search field- Registry Path : HKEY_LOCAL_MACHINE\SYSTEM\CurrentControlSet\services\SharedAccess\Parameters\FirewallPolicy\StandardProfile Registry Key : EnableFirewall. Value : 0 (For GM installer to proceed with installation) : 1 (default value when firewall is enabled) In addition, firewall ports 1521 and 45561 need to be open on the local computer if you have a firewall on.
Continue with the GeneMapper installation which should take over 20 minutes.

How much storage will be available when I sign up for the cloud-based version of GeneMapper Software 6 (Cat. No. A38888)?

When you sign up for a Cloud account, you will get 1 TB of free storage. There is an option to purchase additional storage if you need more. Alternatively, you can regularly remove/delete old data/projects to stay below that 1TB limit.

Can I run GeneMapper Software v6.0 on windows server 2019?

GeneMapper Software v6.0 cannot be installed or run on server computers. It is only supported on Windows Operating Systems. The installation guide can be found here: https://downloads.thermofisher.com/Instrument_Software/CE/GeneMapper/Full_v6.0/100079198_MNL_GENEMAPPER_V_6_INSTALLATION.pdf

Find additional tips, troubleshooting help, and resources within our Capillary Electrophoresis Software Support Center.

Which instruments does GeneMapper Software 6 support?

GeneMapper Software 6 fully supports data generated from the following instruments running all versions of Data Collection Software:

- Applied Biosystems SeqStudio Genetic Analyzer
- Applied Biosystems 3500 Genetic Analyzer
- Applied Biosystems 3500xL Genetic Analyzer
- Applied Biosystems 3130 Genetic Analyzer
- Applied Biosystems 3130xl Genetic Analyzer
- Applied Biosystems 3730 DNA Analyzer
- Applied Biosystems 3730xl DNA Analyzer
- Applied Biosystems 310 Genetic Analyzer

Find additional tips, troubleshooting help, and resources within our Capillary Electrophoresis Applications Support Center.